Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq490 118 5e-22 >seq490 Length=866 Score = 118 bits (130), Expect = 5e-22 Identities = 127/167 (76%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 32721 CATTGGCTTTCACATTCGACTCCGGTACTCCGGCGGCGATTAAGCAGATGCGCCAGAAGC 32780 || ||| |||| || ||||| |||||||| || || |||||||||||||||| |||| Sbjct 501 CACTGGTATTCAACTTTGACTCAGGTACTCCTGCTGCTGTTAAGCAGATGCGCCACAAGC 442 Query 32781 TGTTAATGGGTGAGATTGGTTCCATCAACCTACAGATTGATGAAATCGGCTCCAACC--- 32837 | | |||| ||| |||||| |||| || ||||||||||||||||| ||||| | Sbjct 441 TCCTGATGGCTGATGCTGGTTCAGTCAATCTTCAGATTGATGAAATCGGATCCAATCTAT 382 Query 32838 TGATTAACTCGACCGATGTGCTGAACGTCTTCCTGGAGCTGTATGAC 32884 || ||||| | |||||||| ||| |||||||| || |||||| Sbjct 381 TGGGTAACTTG---GATGTGCTCAACACATTCCTGGAACTCTATGAC 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238811724372670