Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_019767.1 Length=40155 Score E Sequences producing significant alignments: (Bits) Value seq559 127 5e-25 >seq559 Length=544 Score = 127 bits (140), Expect = 5e-25 Identities = 193/272 (71%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 877 AACGTCGAATACAAGGCTTTATCCGCAGAAGGTAAGACGACGCACGGCCTTTCCCCCATT 936 || || || |||||||| | |||| || || ||||| |||||||||| ||| | Sbjct 544 AATGTGGAGTACAAGGCCCTGGCCGCCGATGGCAAGACCGCGCACGGCCTGAGCCCTGTG 485 Query 937 CTGGCCATTCTCGATGAAACAGGGCAGGTTAGGGGCCCGCAGGATGATTTTATCGATGCA 996 |||||||| |||||||||| || ||||| | |||||||| || || ||||| || Sbjct 484 CTGGCCATCCTCGATGAAATCGGCCAGGTGCGTGGCCCGCAAAGCGACTTCATCGACGCC 425 Query 997 ATAACTACGGCGCAGGGGGCTCATGAAAACCCGCTGCTAATCGTTATCAGTACGCAGGCA 1056 || || || || || || ||||||||||||||||| |||| ||| ||||| || Sbjct 424 ATCACCACCAGCCAAGGTGCACATGAAAACCCGCTGCTGATCGCCATCTCGACGCAAGCC 365 Query 1057 GCAAACGATGCTGACCTGCTTAGCATCTGGGTTGATGATGCGGTCAA--ATCG-AAAGAT 1113 ||| || || ||||| || ||| ||| |||| || || ||| | | |||| Sbjct 364 GCATCGGACGCCGACCTCCTGAGCCAGTGGATTGACGACGC---CAAGCGTAGCCAAGAC 308 Query 1114 CCGCACATCGTGTGCCACGTTTATGAAGCGCC 1145 |||| ||||||||||||| | || | ||||| Sbjct 307 CCGCGCATCGTGTGCCACTTGTACGCCGCGCC 276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128372160588826