Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq538 87.8 5e-13 >seq538 Length=774 Score = 87.8 bits (96), Expect = 5e-13 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 18920 CGTCGCCACACGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGC 18979 || |||||||||||||||| || |||| || || | | | ||||| | |||| Sbjct 89 CGCCGCCACACGGCCATCATCAGCGCATCCACCACGAGCTGCGAGGTCATGCTCTCCTGC 148 Query 18980 ATTGACCAGCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAGCCAG 19039 || |||||||| | | |||||| ||||||| | ||| | |||| ||||||||| Sbjct 149 ATCGACCAGCCCACGATGCGCCGCGAGTACAGGTCCAGCACCGCCGCCACGTACAGCCAG 208 Query 19040 CCTTCGTGAGTCCGGATGTAGGTGATGTCCGTTACCCA 19077 || ||| |||| ||||||||||| ||| | |||||| Sbjct 209 CCCTCGGCTGTCCAGATGTAGGTGAAGTCGGCTACCCA 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127101782750160