Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_024142.2 Length=72583 Score E Sequences producing significant alignments: (Bits) Value seq490 122 4e-23 >seq490 Length=866 Score = 122 bits (134), Expect = 4e-23 Identities = 119/151 (79%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 43269 GTCATATAACTCCAGGAACAGGGTTAGTACATCCATGTTAGCCAACAGGTTCGAACCAAT 43328 |||||| | |||||||| | | || ||||||| |||| |||| || || || || || Sbjct 338 GTCATAGAGTTCCAGGAATGTGTTGAGCACATCCAAGTTACCCAATAGATTGGATCCGAT 397 Query 43329 TTCATCAATCTGAAGATTGATTGAACCA-CATCCAGCCATTAATAGTTTATGGCGTAGTT 43387 |||||||||||||||||||| ||||||| ||| ||||||| | || || ||||| | | Sbjct 398 TTCATCAATCTGAAGATTGACTGAACCAGCAT-CAGCCATCAGGAGCTTGTGGCGCATCT 456 Query 43388 GTTTAACTGCTGGTGGAGTACCTGAGTCAAA 43418 | ||||| || | ||||||||||||||||| Sbjct 457 GCTTAACAGCAGCAGGAGTACCTGAGTCAAA 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232136643881696