Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq975 134 1e-26 seq785 120 2e-22 seq1077 86.0 5e-12 >seq975 Length=62782 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||||| ||||| |||||||||||||| | ||| | | | || || Sbjct 60916 ACCAAGTGAAGAGTGCTTTCCTTCTGGATGTTGTAATCCGAGAGGGTCCTCCCATCCTCG 60975 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || || || |||| |||||||||||| | || | |||||||| || Sbjct 60976 AGCTGTTTTCCAGCGAAAATCAGACGCTGCTGATCAGGCGGAATGCCTTCCTTGTCTTGG 61035 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || ||| ||| | || | ||||| || | | ||||| |||| ||| || || || Sbjct 61036 ATTTTCGCCTTTACATTTTCGATGGTATCCGAAGGCTCCACGTCCAGCGTGATGGTTTTC 61095 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| ||||||||||||||||| Sbjct 61096 CCCGTGAGGGTTTTCACGAAGATTTGCAT 61124 >seq785 Length=51992 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || |||| | || |||| ||||| || |||||| || ||||||||||| Sbjct 73 CATGCCACCCCTCAAACGCAGAACCAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATC 132 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| | | || ||||||||||| |||||||| || | |||||||||||| | Sbjct 133 AGAAAGTGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCAGG 192 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| ||| ||||| ||||| || | ||||| || | | || Sbjct 193 AGGAATGCCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATGGTATCTGATGGCTC 252 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| || || || ||||| ||||| || ||||| ||||| Sbjct 253 AACATCCAGAGTAATGGTTTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 303 >seq1077 Length=15226 Score = 86.0 bits (94), Expect = 5e-12 Identities = 124/174 (71%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 44106 TCATTCCCCCTCTC--AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 ||||| ||| ||| || | || |||| ||||| || |||||| || |||||||| Sbjct 193 TCATTGCCCGCCTCGTAGACGCAGAACCAAATGAAGGGTTGACTCCTTCTGAATGTTGTA 134 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | ||| | | || ||||||||||| |||||||| || | |||||||||||| Sbjct 133 ATCAGAAAGTGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATC 74 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTC 44277 | ||| | |||||||| ||| ||||| ||||| || | ||||| || Sbjct 73 AGGAGGAATGCCTTCCTTATCCTGAATCTTTGCCTTCACATTTTCGATGGTATC 20 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359983954934373