Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq443 86.0 5e-12 >seq443 Length=45324 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | || ||||| || ||||||||||| || | ||| || | || Sbjct 284 AGCACCAAGTGAAGGGTTGACTCTTTCTGAATGTTATAATCAGACAGCGTCCTCCCATCT 225 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| ||| ||||||| | |||||| || || | || |||||||| Sbjct 224 TCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCC 165 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | ||| ||| || ||||| || | || || ||| Sbjct 164 TGAATCTTTGCCTTCACGTTCTCGATAGTGTCTGATGGCTCAACATCAAGAGTGATCGTC 105 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | || || ||||| |||||||| Sbjct 104 TTGCCAGTCAGAGTCTTCACAAAGATTTGCAT 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422241625440140