Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq443 131 1e-25 seq144 100 3e-16 >seq443 Length=45324 Score = 131 bits (144), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||||||||| ||||| |||||||| | || ||||| || || Sbjct 72 CATGCAAATCTTTGTGAAGACTCTGACTGGCAAGACGATCACTCTTGATGTTGAGCCATC 131 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| | |||| | || || || ||| | ||||||||| || | || || || | Sbjct 132 AGACACTATCGAGAACGTGAAGGCAAAGATTCA-GGACAAGGAGGGAATTCCTCCTGATC 190 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||||||||| || || || ||||| ||| ||||||| | ||| || ||||||| Sbjct 191 AGCAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGGAGGACGCTGTCTGATTATA 250 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||| ||||| || || ||||| |||| || Sbjct 251 ACATTCAGAAAGAGTCAACCCTTCACTTGGTGCT 284 >seq144 Length=153386 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||||||||| || ||||| || || || ||||| || ||| | || || || || Sbjct 49865 AAGATGCAAATTTTTGTGAAGACGCTAACGGGTAAAACCATTACCCTTGATGTGGAGCCT 49806 Query 31250 TCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| | |||||| || || || ||| | ||||||||| || | || || || Sbjct 49805 TCTGACACTATCGAAAATGTGAAGGCAAAGA-TCCAGGACAAGGAGGGTATTCCTCCTGA 49747 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || || ||||| || ||| | || ||| | ||| | ||| || Sbjct 49746 CCAGCAGCGCCTTATCTTTGCTGGGAAGCAGCTTGATGACGGCAGAACTCTCTCCGACTA 49687 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 |||||||| || ||| || || || |||||| Sbjct 49686 CAACATTCAGAAGGAAAGCACACTCCACCTGGTA 49653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445747371346800