Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq443 89.7 4e-13 >seq443 Length=45324 Score = 89.7 bits (98), Expect = 4e-13 Identities = 165/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 43884 CCAATCATCAACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATAT 43943 ||| ||| || || |||||||| | | |||||| || || || |||||| ||||| | Sbjct 310 CCACTCAGCAGCCACCTCTCAAGCGCAGCACCAAGTGAAGGGTTGACTCTTTCTGAATGT 251 Query 43944 TATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCT 44003 ||||||| | | | |||| |||| || || || ||||| || | || |||| Sbjct 250 TATAATCAGACAGCGTCCTCCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCT 191 Query 44004 GGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTG 44063 | || |||| | || || || || ||| ||| || || | | | ||| |||| Sbjct 190 GATCAGGAGGAATTCCCTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCGATAGTGTCTG 131 Query 44064 CCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATGT 44123 ||||| ||||| | || || || || || || | |||||||||||| ||||||||| Sbjct 130 ATGGCTCAACATCAAGAGTGATCGTCTTGCCAGTCAGAGTCTTCACAAAGATTTGCATGC 71 Query 44124 CG 44125 || Sbjct 70 CG 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354762834045420