Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq443 140 7e-28 seq743 111 4e-19 >seq443 Length=45324 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| ||||| ||||| || || || || ||||| || || || || Sbjct 269 GTTGACTCTTTCTGAATGTTATAATCAGACAGCGTCCTCCCATCTTCCAGCTGCTTGCCG 210 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | ||| ||||||||||| ||||| || || |||||||||||||| || Sbjct 209 GCAAAAATAAGACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGAATCTTTGCCTTC 150 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || || || || || || || || || ||||| ||||| || || Sbjct 149 ACGTTCTCGATAGTGTCTGATGGCTCAACATCAAGAGTGATCGTCTTGCCAGTCAGAGTC 90 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 89 TTCACAAAGATTTGCAT 73 >seq743 Length=20979 Score = 111 bits (122), Expect = 4e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 ||||| || || || || |||||||| || | ||| ||||||||||| ||||| || || Sbjct 3 TCTTCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGATCAGGAGGAATTCCCTCCTTG 62 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 || ||||||||||| ||||| || || | || || || || || ||||| || || Sbjct 63 TCTTGAATCTTTGCCTTTACGTTCTCGATAGTGTCTGATGGCTCAACATCTAGAGTGATG 122 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| || || || || || ||||| ||||||||| Sbjct 123 GTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCATT 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151348020922820