Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq443 86.0 6e-12 seq563 82.4 7e-11 >seq443 Length=45324 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | ||||| || ||||||| | || | || || Sbjct 73 ATGCAAATCTTTGTGAAGACTCTGACTGGCAAGACGATCACTCTTGATGTTGAGCCATCA 132 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | || || ||||||| ||||| || || || ||||| ||||| Sbjct 133 GACACTATCGAGAACGTGAAGGCAAAGATTCAGGACAAGGAGGGAATTCCTCCTGATCAG 192 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || |||| | |||||| || || ||||||| || | | || |||||| Sbjct 193 CAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGGAGGACGCTGTCTGATTATAAC 252 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||| || || | || |||| ||| | | ||||| || Sbjct 253 ATTCAGAAAGAGTCAACCCTTCACTTGGTGCTGCGCTTGAGAGGTGG 299 >seq563 Length=35025 Score = 82.4 bits (90), Expect = 7e-11 Identities = 154/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 || ||||||| || |||||| | ||||| ||| || ||||| | |||||| || Sbjct 24182 ACACATGATGCTCTCTGGAATACAGCTCAATTACAACTCGTTAATGAAGCTAAAATGAAC 24123 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 || | | ||||||||||||||| || || || | |||||| | || | ||| Sbjct 24122 GGGTTCTTACGCATGTACTGGGTAAAGAAAATCTTAGAGTGGCAGCTGTCTGCAGAGACA 24063 Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851 || || ||||||| |||||| | || |||| || | | ||||| || ||||| Sbjct 24062 GCTCTAAAGTATTCAATTTATTTTAATGATAAATTCTCATTAGACGGAACAGACCCTAAT 24003 Query 71852 GGTTATGTCGGTTGCATGTGGAGCATTTGC-GGTCTTCACGATA 71894 || |||||||| || | ||| | || || |||||||| |||| Sbjct 24002 GGATATGTCGGCTGTCTCTGG-GGTTTAGCTGGTCTTCATGATA 23960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478641967098800