Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq144 98.7 8e-16 >seq144 Length=153386 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16726 TACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTC 16785 ||||| || || ||| ||||| || ||||||||||||| | ||| || |||| || Sbjct 49653 TACCAGGTGGAGTGTGCTTTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCGTCATC 49712 Query 16786 CAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--G 16843 | || || || ||| | ||||| ||||| ||||| ||| | ||||| ||||| | Sbjct 49713 AAGCTGCTTCCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTG 49772 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 | ||||| |||||| | | | |||||| |||||| || | ||| |||||| Sbjct 49773 GATCTTTGC--CTTCACATTTTCGATAGTGTCAGAAGGCTCCACATCAAGGGTAATGGTT 49830 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || || || ||||| || |||||||| ||||| || Sbjct 49831 TTACCCGTTAGCGTCTTCACAAAAATTTGCATCTT 49865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405071140110850