Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq583 98.7 2e-15 >seq583 Length=104782 Score = 98.7 bits (108), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 142057 CTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 98239 CTGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAATCCCG 98180 Query 142117 CC 142118 || Sbjct 98179 CC 98178 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 97898 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 97839 Query 142118 C 142118 | Sbjct 97838 C 97838 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 98772 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 98713 Query 142118 C 142118 | Sbjct 98712 C 98712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027791827322015