Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq443 102 2e-16 >seq443 Length=45324 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || ||||| || | ||||| | || ||||| | || || || || || Sbjct 263 TCTTTCTGAATGTTATAATCAGACAGCGTCCTCCCATCTTCCAGCTGCTTGCCGGCAAAA 204 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| ||| | || ||||| || || ||||| || || || |||||||| Sbjct 203 ATAAGACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGAATCTTTGCCTTCACGTTC 144 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || | || || || || ||||||||||| || ||||||||||| || Sbjct 143 TCGATAGTGTCTGATGGCTCAACATCAAGAGTGATCGTCTTGCCAGTCAGAGTCTTCACA 84 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 83 AAGATTTGCAT 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179602784590370