Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq443 93.3 4e-14 seq144 93.3 4e-14 >seq443 Length=45324 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 138384 GCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC 138443 |||||| |||| ||| |||| || || || | | ||||||| || |||||||| || || Sbjct 303 GCAGCCACCTCTCAAGCGCAGCACCAAGTGAAGGGTTGACTCTTTCTGAATGTTATAATC 244 Query 138444 GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGG 138503 || || | | || || || || || |||| | | || |||||||| || || || Sbjct 243 AGACAGCGTCCTCCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGATCAGG 184 Query 138504 AGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACT 138562 ||| || || || ||||| ||| | |||| || | | || | ||||| | | || Sbjct 183 AGGAATTCCCTCCTTGTCC-TGAATCTTTGCCTTCACGTTCTCGATAGTGTCTGATGGCT 125 Query 138563 CCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | || || | || | ||| || ||||||||||| || ||||| || |||||| Sbjct 124 CAACATCAAGAGTGATCGTCTTGCCAGTCAGAGTCTTCACAAAGATTTGCATG 72 >seq144 Length=153386 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| ||||||||||||||| | ||| | ||| || || || || || | | || Sbjct 49672 TCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCGTCATCAAGCTGCTTCCCAGCAAAG 49731 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT 138543 || || ||||| ||||| ||||| ||||| || ||||| ||| ||| || | | | Sbjct 49732 ATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTCACATTT 49791 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||| | | |||||| || | || | |||||||| || || || || ||| Sbjct 49792 TCGATAGTGTCAGAAGGCTCCACATCAAGGGTAATGGTTTTACCCGTTAGCGTCTTCACA 49851 Query 138604 AAAATCTGCAT 138614 ||||| ||||| Sbjct 49852 AAAATTTGCAT 49862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496241215798800