Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq144 96.9 2e-15 >seq144 Length=153386 Score = 96.9 bits (106), Expect = 2e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045 || || || |||||||| ||| |||| |||| |||| || | || || ||||| | Sbjct 49672 TCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCGTCATCAAGCTGCTTCCCAGCAAAG 49731 Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAAT 15104 || | ||||| ||||| ||||| || |||||||| || ||||| || ||| | Sbjct 49732 ATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTC-ACATT 49790 Query 15105 TTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTAC 15164 ||| ||||| || | || || || | ||||||||||||||| || || || || || Sbjct 49791 TTCGATAGTGTCAGAAGGCTCCACATCAAGGGTAATGGTTTTACCCGTTAGCGTCTTCAC 49850 Query 15165 AAAAATTTGCATATT 15179 |||||||||||| || Sbjct 49851 AAAAATTTGCATCTT 49865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357377125233275