Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq443 105 7e-18 seq144 105 7e-18 >seq443 Length=45324 Score = 105 bits (116), Expect = 7e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || ||||| || ||||| | || || ||| | | Sbjct 73 ATGCAAATCTTTGTGAAGACTCTGACTGGCAAGACGATCACTCTTGATGTTGAGCCATCA 132 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||| || | ||||| ||||||||||| | || || Sbjct 133 GACACTATCGAGAACG-TGAAGGCAAAGATTCAGGACAAGGAGGGAATTCCTCCTGATCA 191 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| || ||||| |||||||| || | | | || || || || || Sbjct 192 GCAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGGAGGACGCTGTCTGATTATAA 251 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474 ||| || || || | || || || ||||||||||| |||||||| ||| || Sbjct 252 CATTCAGAAAGAGTCAACCCTTCACTTGGTGCTGCGCTTGAGAGGTGGCTGC 303 >seq144 Length=153386 Score = 105 bits (116), Expect = 7e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 38235 TTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 38294 |||| || |||||||| || || || ||||| ||||| |||||||| ||| | || || Sbjct 49871 TTTACGAAGATGCAAATTTTTGTGAAGACGCTAACGGGTAAAACCATTACCCTTGATGTG 49812 Query 38295 GAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCC 38354 ||| | | |||| | ||| | || | ||| |||| ||||| ||||| ||||| Sbjct 49811 GAGCCTTCTGACACTATCGAAAATGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCT 49752 Query 38355 GCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 38414 | ||||| ||||| || || | || || || ||||| || |||| | || ||| | Sbjct 49751 CCTGACCAGCAGCGCCTTATCTTTGCTGGGAAGCAGCTTGATGACGGCAGAACTCTCTCC 49692 Query 38415 GACTACAACATCCAAAAGGAA 38435 ||||||||||| || |||||| Sbjct 49691 GACTACAACATTCAGAAGGAA 49671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500151448873600