Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq443 152 1e-31 seq743 96.9 8e-15 >seq443 Length=45324 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || |||||||| ||||| || ||||| | || || ||||||||||| ||||| Sbjct 276 GTGAAGGGTTGACTCTTTCTGAATGTTATAATCAGACAGCGTCCTCCCATCTTCCAGCTG 217 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || ||||| || || || || |||||||| || || ||||| ||||| || Sbjct 216 CTTGCCGGCAAAAATAAGACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGAATCTT 157 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| |||||||| || ||||| || || || ||||| || | |||||| || || Sbjct 156 TGCCTTCACGTTCTCGATAGTGTCTGATGGCTCAACATCAAGAGTGATCGTCTTGCCAGT 97 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||| || || || | |||||| Sbjct 96 CAGAGTCTTCACAAAGATTTGCAT 73 >seq743 Length=20979 Score = 96.9 bits (106), Expect = 8e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 194984 CATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTT 195043 ||||||| |||||||| || || || ||||| || || || || |||||||| || || | Sbjct 1 CATCTTCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGATCAGGAGGAATTCCCTCCT 60 Query 195044 TGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAA 195103 |||||||||| ||| ||| |||||||| || ||||| || || || || || || | Sbjct 61 TGTCTTGAATCTTTGCCTTTACGTTCTCGATAGTGTCTGATGGCTCAACATCTAGAGTGA 120 Query 195104 CCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || || | || || || || | |||||| Sbjct 121 TGGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCATT 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109433054979305