Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq144 87.8 2e-12 >seq144 Length=153386 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| ||||| || || |||||||||||||||||||| || ||| ||| Sbjct 49865 AAGATGCAAATTTTTGTGAAGACGCTAACGGGTAAAACCATTACCCTTGATGTGGAGCCT 49806 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || | ||| ||| ||| ||||| ||||| | || || Sbjct 49805 TCTGACACTATCGAAAATGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCTGAC 49746 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || ||| | ||||||||||| || || || | || || | |||| | |||| || Sbjct 49745 CAGCAGCGCCTTATCTTTGCTGGGAAGCAGCTTGATGACGGCAGAACTCTCTCCGACTAC 49686 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 |||||||| || ||| || || ||| ||||| Sbjct 49685 AACATTCAGAAGGAAAGCACACTCCACCTGGTA 49653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425387094519285