Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq200 123 1e-23 >seq200 Length=58787 Score = 123 bits (136), Expect = 1e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984 ||| | | ||| ||||| || || | ||| | ||| ||| | ||||| ||||||||| Sbjct 56134 ACTCTTTGCATGAATAAGTCGGGGACCCAAAGGGCAGGAAAGAGGTCTCTTGCTCTCATT 56075 Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044 |||||||| |||||||||||| | | |||| || ||||| ||||||| ||||| || Sbjct 56074 TCTTCTTTACCGTGATTCTTTCTGATCTCTAGAAACTCAAATATATCTGCATGCCACGGC 56015 Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTA 26097 || | ||| | |||| ||| || || | ||| ||||| |||||||||||||| Sbjct 56014 TCAACATACACCGCAAGACTGCCCTTGCGTTTACCTCCTCCTTGATCTACGTA 55962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253029468396125