Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq443 136 4e-27 seq743 102 7e-17 >seq443 Length=45324 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || || || || || || || || || |||| | Sbjct 73 ATGCAAATCTTTGTGAAGACTCTGACTGGCAAGACGATCACTCTTGATGTTGA-GCCATC 131 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||| || ||||| || ||||| ||||| ||||| Sbjct 132 AGACACTATCGAGAACGTGAAGGCAAAGATTCAGGACAAGGAGGGAATTCCTCCTGATCA 191 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | || |||||||| || |||||||| ||| ||| | |||| |||||||| Sbjct 192 GCAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGGAGGACGCTGTCTGATTATAA 251 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||| || || || || || ||||||||| |||| ||| | || ||| Sbjct 252 CATTCAGAAAGAGTCAACCCTTCACTTGGTGCTGCGCTTGAGAGGTGGC 300 >seq743 Length=20979 Score = 102 bits (112), Expect = 7e-17 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||||||| | || || || || || || || || || || || || | |||| Sbjct 160 ACAATGCAGATCTTTGTCAAGACCCTCACGGGGAAGACCATCACTCTAGATGTTG-AGCC 102 Query 24761 A-CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 | | ||||| | || | ||||| |||||| |||||||| || ||||| ||||| || Sbjct 101 ATCAGACACTATCGAGAACGTAAAGGCAAAGATTCAAGACAAGGAGGGAATTCCTCCTGA 42 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 ||| || ||| | || |||||||| || |||||||| ||| Sbjct 41 TCAGCAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAAGAT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449878394996200