Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq59 89.7 1e-12 >seq59 Length=10154 Score = 89.7 bits (98), Expect = 1e-12 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 305294 GATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCA 305353 ||| ||||| |||||| | ||||| ||| || ||||| ||||| ||||| || Sbjct 9339 GATGTTGTTGAAAGACATCTTAATGAAGGAGATGTTGTGCTGTTTAATAGACAACCTTCT 9398 Query 305354 CTGCATAAAATGTCTATGATGGCTCATAAAGTCAA-AGTATTATCTGGATTGACATTTCG 305412 || |||| | | ||| |||| |||||| | ||| ||| | | || ||| | | Sbjct 9399 CTACATAGATTAAGTATCATGGGTCATAA-GACAAGAGTTATGCCGGGTAGGACGCTGAG 9457 Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472 ||| || | | ||| ||| | ||||||||||| || ||||| || ||||| |||||||| Sbjct 9458 ATTTAACGAATGTGTTTGCTCTCCTTATAATGCAGACTTTGACGGTGATGAGATGAATAT 9517 Query 305473 GCATGTACCTCAATCA 305488 ||| |||||||| || Sbjct 9518 ACATTTACCTCAAACA 9533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186760871376815