Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq443 102 2e-16 >seq443 Length=45324 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || ||||||||| | || || || || ||||| |||| Sbjct 88 AAGACTCTGACTGGCAAGACGATCACTCTTGATGTTGAGCCATCAGACACTATCGAGAAC 147 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || || || |||||| || || || | ||||| || Sbjct 148 GTGAAGGCAAAGATTCAGGACAAGGAGGGAATTCCTCCTGATCAGCAGCGTCTTATTTTT 207 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||||||||| ||||| || | ||||| ||| | ||||||||||| Sbjct 208 GCCGGCAAGCAGCTGGAAGATGGGAGGACGCTGTCTGATTATAACATTCAGAAAGAGTCA 267 Query 206365 ACTCTTCAC 206373 || |||||| Sbjct 268 ACCCTTCAC 276 Score = 87.8 bits (96), Expect = 4e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828 |||||| || ||||||||||| | ||||| |||| || ||||| |||||||||||||| Sbjct 276 GTGAAGGGTTGACTCTTTCTGAATGTTATAATCAGACAGCGTCCTCCCATCTTCCAGCTG 217 Query 204829 CTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||| ||||| || ||||| || || ||| Sbjct 216 CTTGCCGGCAAAAATAAGACGCTGCTGA 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181769089800215