Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq843 508 2e-138 seq443 165 2e-35 seq3076 134 4e-26 seq144 129 2e-24 seq743 123 8e-23 seq333 100 9e-16 seq2655 91.5 4e-13 seq1017 91.5 4e-13 seq653 87.8 5e-12 seq583 87.8 5e-12 >seq843 Length=181884 Score = 508 bits (562), Expect = 2e-138 Identities = 1004/1471 (68%), Gaps = 15/1471 (1%) Strand=Plus/Minus Query 349203 TAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAG 349262 |||| || ||| | || || || ||||| ||||| | ||| ||| | || || |||||| Sbjct 178273 TAGGTATAGATCTCGGGACGACATATTCATGTGTAGGTGTGTGGAAGAACGACGGTGTAG 178214 Query 349263 AAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAA 349322 | || || || |||||||| ||||| ||||| || || || || ||||||||||| || | Sbjct 178213 AGATTATAGCGAATGATCAGGGTAATAGAACGACACCGTCTTATGTTGCATTTACAGATA 178154 Query 349323 CTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGG 349382 | ||| | | | || ||| | ||||| ||||| | || || || ||||||| | Sbjct 178153 CAGAGAGGTTAGTAGGAGATGCAGCAAAGAATCAGGTCGCAAGAAACCCTGAAAATACTG 178094 Query 349383 TTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATC 349442 | ||||||||||| || | || || |||| || ||| || ||| | ||| Sbjct 178093 TCTTTGATGCTAAAAGATTAATCGGAAGAAAGTTCGATGATCCGGCTGTACAGGCAGATA 178034 Query 349443 TAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTG 349502 | ||||| | || ||||| ||| || || | || || | || || ||| Sbjct 178033 TGAAACACTGGCCGTTTACAGTTAAAGCAGGTCCAGGAGGCAAGCCTCTAATAGAAGTTA 177974 Query 349503 AATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTT 349561 | ||| |||| | ||| || | ||| | || ||||| || ||| ||||||| || | Sbjct 177973 ATTATCAAGGC-AGCAAGAAGACCTTTCATCCTGAAGAGATATCAGCAATGGTCTTGATG 177915 Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || ||||| ||||| |||||||||| |||| || ||| | || |||||||||||| Sbjct 177914 AAGATGAAAGAAATAGCTGAAGCATTCATAGGGAAAGAAGTTAAAGAAGCTGTTATTACT 177855 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 ||||| || |||||||| || | || | |||||||||||||| || | || || Sbjct 177854 GTACCTGCATATTTTAACGACTCACAAAGACAAGCAACAAAAGATGCAGGGACTATCGCA 177795 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || |||||||| ||||||| |||||||| || ||||| ||||| |||||||| || | Sbjct 177794 GGATTAAATGTCTTAAGAATTATTAATGAGCCTACTGCAGCAGCTATTGCATACGGTTTA 177735 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 ||||| | | || || | ||| | ||||| |||||| | || || ||||| ||| Sbjct 177734 GATAAGAAAGGACACGGGGAGATGAATGTGCTTATCTTTGATATGGGAGGGGGTACCTTT 177675 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 |||||||| || ||||| ||||||| || |||||||| |||||||| || ||||| ||| Sbjct 177674 GATGTATCTTTATTAACAATTGAAGACGGTATTTTTGAGGTTAAAGCTACAGCTGGAGAT 177615 Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT--GTTAAAGAAT 349919 |||||| | || || ||||| ||||||||| | || | | | |||| ||| |||| | Sbjct 177614 ACACATTTAGGAGGTGAAGACTTTGATAATAGACT--TGTAGATTTTTGCGTTCAAGATT 177557 Query 349920 TTAAGCGTCAAGCTA-AAATTGATATTGGAG-ATAATC-CTAGAGCAATGCGTCGCCTAA 349976 | ||| | | || || | || ||| | || | | | ||| | | || || Sbjct 177556 TCAAGAGAAAGAATAGAAGCAAAGATCCGAGCACAAACAGTCGTGCATTAAGGCGTCTTC 177497 Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036 | || |||||| | || || | | |||||| | || ||| | | ||||| | Sbjct 177496 GTACACAATGTGAAAGAGCAAAAAGAACATTATCAAGCAGCACACAAGCAACAATTGAGA 177437 Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096 | || ||| | ||| || | |||| | | || | | | ||||| ||||||| Sbjct 177436 TAGACTCTTTATTTGAGGGTATTGATTATTCTGTCTCCCTCTCTAGAGCTCGCTTTGAAG 177377 Query 350097 AATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA-T 350155 || |||| |||||| || || | | | ||||| ||||| || | ||||| Sbjct 177376 AACTATGCATGGATTACTTCAGGAACTCTCTTGTACCTGTTGAAAAGGTTCTGAAAGACA 177317 Query 350156 GCAAAAATGTCCAAAAATCAG-ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 || | || ||| ||| | |||||||||| | || ||||| ||||| ||||| Sbjct 177316 GCGGCATTG--ATAAACGCAGTGTACATGAAGTAGTACTTGTCGGTGGATCTACTCGTAT 177259 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAAT 350274 ||| || | || || | | |||||||| || || || || |||| |||| || Sbjct 177258 TCCGAAGATACAGCAACTTATTCAAGAGTTTTTCAACGGTAAGGAGCCTTGCCGATCGAT 177199 Query 350275 TAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAA 350334 ||| || |||||||||||||||||||||||||| ||||| ||| | || || || Sbjct 177198 TAACCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCAATATTGAAGGGGGT 177139 Query 350335 TAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATT 350394 ||| || | || | | |||||||||||| ||||||| | || || || | || || Sbjct 177138 TAACAGCAGTCAAGTACAAGATCTATTACTATTAGATGTTGCACCTCTATCATTAGGTTT 177079 Query 350395 AGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAA 350454 |||||| | || | |||||||| | ||| ||||||| || |||||||||| Sbjct 177078 AGAAACAGCAGGGGGTGTAATGACGAAATTGATTGAAAGAAATACAACAATACCTACAAA 177019 Query 350455 AAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATT 350514 ||||| || | || | |||| ||||||||||||||| | ||| |||||||| || Sbjct 177018 GAAGTCTCAGATCTTCACAACATATGCAGATAATCAGCCGGGTGTACTTATTCAAGTCTT 176959 Query 350515 TGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAG-TG 350573 |||||| || | ||| ||||| ||||||||| ||| | || || | | || | Sbjct 176958 TGAAGGAGAGAGAGCTATGACTAAGGATAATAAT-CTCTTAGGTAAGTTTCATTTAGACG 176900 Query 350574 AAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAA 350633 ||||| || || ||||| || || ||||| || || | ||||||||||| ||| Sbjct 176899 GTATTCCGCCGGCACCGAGAGGCGTACCGCAGATAGAGGTGACGTTCGATATTGACGCAA 176840 Query 350634 ATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 | |||||| | ||||| || ||| ||||| Sbjct 176839 ACGGTATTATGAATGTAACTGCAACAGAAAA 176809 Score = 412 bits (456), Expect = 1e-109 Identities = 761/1102 (69%), Gaps = 28/1102 (3%) Strand=Plus/Plus Query 182704 CTTTAGTTTTTTCATCATTTATTATACTTTGCATTTGAAAACAATATCCTTCAAGATTAT 182763 ||||| | |||||||| | || ||| | |||| | | ||||| |||||| || Sbjct 176610 CTTTA-TCTTTTCATCCTCCATAGTACCTCTCATTGAATAGCAATAGTTTTCAAGTGCAT 176668 Query 182764 TTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCTTTAGC---ATACTTTTCAGCAT 182820 | ||||| || | ||| |||| | | |||||||| ||| ||| || ||||| | Sbjct 176669 TCTTAGCTTCTACTCTTTGTTTATTTGCTTCATCTTC---AGCCTTATATTTCTCAGCTT 176725 Query 182821 CCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCATTTGTAATTACTA 182880 | | ||| || || |||||| ||| || | ||| ||| |||||||| | Sbjct 176726 CAGCTACCATCCTATCGATTTCACCTTGGCTTAGTCGTCCTTTATCGTTTGTAATAGTGA 176785 Query 182881 CATTACTAGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGT 182940 | | | | | || || ||||| ||| | ||||| | |||||| || | || Sbjct 176786 TTTGATTTGATTTACCGGTGTTCTTTTCTGTTGCAGTTACATTCATAATACCGTTTGCGT 176845 Query 182941 CAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTA 183000 ||| ||| || | || || ||||| || || |||| || || ||||| || || Sbjct 176846 CAATATCGAACGTCACCTCTATCTGCGGTACGCCTCTCGGTGCCGGCGGAATACCGTCTA 176905 Query 183001 AAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTT 183060 || ||| | |||||| ||||||||| ||||| | |||||||| |||||| | |||| Sbjct 176906 AATGAAACTTACCTAAGAGATTATTATCCTTAGTCATAGCTCTCTCTCCTTCAAAGACTT 176965 Query 183061 GAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATAG 183120 ||||| || | ||||||||||| ||| || | || | || || || ||| Sbjct 176966 GAATAAGTACACCCGGCTGATTATCTGCATATGTTGTGAAGATCTGAGACTTCTTTGTAG 177025 Query 183121 GAATAGTTGAATTTCGCGGAA-CAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCT 183179 | || |||| ||||| || ||||| | |||||||| | | || |||||||| ||| Sbjct 177026 GTATTGTTGTATTTCTTTCAATCAATTTC-GTCATTACACCCCCTGCTGTTTCTAAACCT 177084 Query 183180 AATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTTATCTGAT-TTAATATC 183238 ||||||| ||||| ||||||| || ||||| |||| | || | ||| | |||| | Sbjct 177085 AATGATAGAGGTGCAACATCTAATAGTAATAGATCTTGTACTTGA-CTGCTGTTAACCCC 177143 Query 183239 ACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGA 183298 | || ||||| |||||||| || ||||||||||||||||||||||| |||||||| || Sbjct 177144 CTTCAATATTGCTGCTTGAACTGCAGCACCATATGCAACAGCTTCATCAGGGTTAATCGA 177203 Query 183299 ACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCT 183358 || | || || || || ||||| ||| || | ||| || || || ||||| | Sbjct 177204 TCGGCAAGGCTCCTTACCGTTGAAAAACTCTTGAATAAGTTGCTGTATCTTCGGAATACG 177263 Query 183359 AGTTGAACCACCGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTT 183418 ||| || |||||||| | ||||||||||| | | | | |||| ||| ||||| Sbjct 177264 AGTAGATCCACCGACAAGTACTACTTCATGTACACTGCGTTTATCAATGCCGCTGTCTTT 177323 Query 183419 TAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAA 183478 | ||| ||||||||||| | | || || || || |||| || |||| ||||| || Sbjct 177324 CAGAACCTTTTCAACAGGTACAAGAGAGTTCCTGAAGTAATCCATGCATAGTTCTTCAAA 177383 Query 183479 TCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAAT 183538 | ||||||| | || | || | |||||||| | | |||| || || || ||||| Sbjct 177384 GCGAGCTCTAGAGAGGGAGACAGAATAATCAATACCCTCAAATAAAGAGTCTATCTCAAT 177443 Query 183539 CGATGTTTGTGTAGATG-ATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTC 183597 | || |||||| | || ||||||||||||||| |||| ||||||| ||| | || | Sbjct 177444 TGTTGCTTGTGT-GCTGCTTGATAATGTTCTTTTTGCTCTTTCACATTGTGTACGAAGAC 177502 Query 183598 GACGTAATGATCTTGGATTATCTGTAAT---ATCTT---GTTTATGTTTTCTTTTAAATT 183651 | | ||||| | || | | ||| | ||||| | ||| ||||| || || | Sbjct 177503 GCCTTAATGCAC---GACTGTTTGTGCTCGGATCTTTGCTTCTATTCTTTCTCTTGAAAT 177559 Query 183652 CAGTAA---TAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTAT 183708 | || ||||| | ||| ||| ||||||| |||||||| ||||||||||||| Sbjct 177560 CTTGAACGCAAAAATCTACAAG---TCTATTATCAAAGTCTTCACCTCCTAAATGTGTAT 177616 Query 183709 CGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAA 183768 | ||||| ||||||||||| ||||| || ||||||||||| |||| | |||||||||| Sbjct 177617 CTCCAGCTGTAGCTTTAACCTCAAAAATACCGTCTTCAATTGTTAATAAAGATACATCAA 177676 Query 183769 ATGTACCACCACCCAAATCAAA 183790 | ||||| || |||| |||||| Sbjct 177677 AGGTACCCCCTCCCATATCAAA 177698 >seq443 Length=45324 Score = 165 bits (182), Expect = 2e-35 Identities = 162/208 (78%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| || |||||||| ||||| ||||||||||| | || | ||||||||| | Sbjct 279 CAAG-TGAAGGGTTGACTCTTTCTGAATGTTATAATCAGACAGCGTCCTCCCATCTTCCA 221 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || ||||| || ||||| |||||||||||||||||||| || || ||||||| Sbjct 220 GCTGCTTGCCGGCAAAAATAAGACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGAA 161 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || || || | || ||||| ||||| ||||| || | ||||| | Sbjct 160 TCTTTGCCTTCACGTTCTCGATAGTGTCTGATGGCTCAACATCAAGAGTGATCGTCTTGC 101 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || ||||| || ||||| Sbjct 100 CAGTCAGAGTCTTCACAAAGATTTGCAT 73 >seq3076 Length=33010 Score = 134 bits (148), Expect = 4e-26 Identities = 200/280 (71%), Gaps = 8/280 (3%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || || ||| |||| ||||||| || | ||||||||| ||| |||| || || | Sbjct 29308 CCTGAGGAAGTTTCTGCAATGGTGTTGGGTAAAATGAAAGAAGTTGCAGAGAACTACCTC 29367 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 ||| || ||| | |||| || |||| || || || || || || ||||| ||||| Sbjct 29368 GGTAAAGAAGTCAAGAATGCAGTCGTTACCGTGCCCGCATACTTCAACGATGCACAGCGC 29427 Query 349652 TCTGCAACAAAAGATGCTGGCAGCA-TTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 || ||||| ||||| || |||| |||| || || ||||| | | || || || || Sbjct 29428 CAAGCTACAAAGGATGCAGG-AGCAATTGCAGGTTTGAATGTCATTCGTATCATCAACGA 29486 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770 ||||||||| ||||| |||||||||||||| || || || ||| ||||| | ||| Sbjct 29487 ACCCACTGCCGCAGCTATTGCATATGGGCTCGACAA---GAAAGAC---GAAAAGACTAT 29540 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCA 349810 |||| | | ||| | ||||| ||||| ||||| || ||| Sbjct 29541 TCTTGTCTACGATCTTGGTGGAGGTACCTTTGACGTTTCA 29580 Score = 93.3 bits (102), Expect = 1e-13 Identities = 196/287 (68%), Gaps = 8/287 (3%) Strand=Plus/Plus Query 350050 TGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGA 350109 ||||||| | || |||| | || | || || ||| ||||||||||| || ||| | Sbjct 30152 TGATGGCGAGGACTTCTCAGAAACTCTGACTCGCGCTAAGTTTGAAGAAT--TGAATGCA 30209 Query 350110 TCTTT-TTAGAGCA-ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCC 350167 ||| || || | || || | || || | |||| || ||||||| | || Sbjct 30210 GATTTGTTCCAGAAGACTTTGAAACCAGTCAAGCAAGTGTTGGAAGATGCTGATCTGAAG 30269 Query 350168 AAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAA 350227 || ||||||||| ||| | || || || ||||| ||||| |||||||| || |||| Sbjct 30270 AAGTCTCAGATTGACGAAATTGTGTTGGTGGGTGGCTCTACTCGTATTCCTAAGATTCAG 30329 Query 350228 CAGTTACTATC--TGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATG 350285 ||| | |||| ||||| || || || || ||||| ||| || || || || | Sbjct 30330 CAGCT--TATCAAGGAGTTCTTCAACGGAAAGGAACCCAACAGAGGCATCAACCCCGACG 30387 Query 350286 AAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 |||| || || |||||||| || |||||||| |||| | |||||| Sbjct 30388 AAGCCGTCGCTTATGGTGCAGCAGTTCAGGCGGGTATTCTTTCTGGA 30434 Score = 87.8 bits (96), Expect = 5e-12 Identities = 213/320 (67%), Gaps = 2/320 (1%) Strand=Plus/Minus Query 182747 ATATCCTTCAAGATTATTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCTTTAGC 182806 ||||||||||||| |||| | || || | ||| ||||| || ||||| | ||| Sbjct 31235 ATATCCTTCAAGAGCATTTCTTGCATCCACTCTTTCTTTAGTTTTTCTGTCTTCATCAGC 31176 Query 182807 ATACTTTTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATC 182866 | |||| || || ||| |||| || || || ||||| | |||| |||| ||| Sbjct 31175 AAACTTCTCTGCCTCCTGAATCATCCTCTCAATCTCATCAGGGGTAAGACGACCCTTATC 31116 Query 182867 ATTTGTAATTACTACATTACT-AGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTA 182925 ||| || || | || | || | | ||| || || |||| ||| |||||||| | Sbjct 31115 ATTGGTGAT-AGTAATCTTCTCACTCTTTCCTGTCCCCTTATCAACTGCACTAACATTCA 31057 Query 182926 AAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTG 182985 ||||||| || ||||||||||| | || || ||||| ||||| || || || | Sbjct 31056 AAATACCGTTTCTATCAACATCAAACGTAACATCTATCTGAGGAACTCCACGAGGTGCAG 30997 Query 182986 GTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCT 183045 ||||||| || || || ||| | ||||| || ||| | || || ||| | | Sbjct 30996 GTGGAATACCCGTCAACTCAAACTTTCCTAACAAATGATTGTTCTTCGTCATTGGGCGTT 30937 Query 183046 CGCCTTCATATACTTGAATA 183065 | ||||| || || || ||| Sbjct 30936 CACCTTCGTACACCTGCATA 30917 >seq144 Length=153386 Score = 129 bits (142), Expect = 2e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 140547 TCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAG 140606 || || ||||| || || || || | |||| || || ||||| || || ||||||||| Sbjct 49672 TCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCGTCATCAAGCTGCTTCCCAGCAAAG 49731 Query 140607 ATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTA 140666 || || || ||||| ||||||||||| || || || ||||| || || || || ||||| Sbjct 49732 ATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTCACATTT 49791 Query 140667 TCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACA 140726 || || | ||||| || || || ||||| |||| || || || ||||| || || ||| Sbjct 49792 TCGATAGTGTCAGAAGGCTCCACATCAAGGGTAATGGTTTTACCCGTTAGCGTCTTCACA 49851 Query 140727 AAAATCTGCAT 140737 ||||| ||||| Sbjct 49852 AAAATTTGCAT 49862 >seq743 Length=20979 Score = 123 bits (136), Expect = 8e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 140581 CATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTT 140640 ||||||| || || || || ||||| || ||||| |||||||||||||||||||| || | Sbjct 1 CATCTTCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGATCAGGAGGAATTCCCTCCT 60 Query 140641 TATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAA 140700 | || ||||| || || ||||| || || || | || ||||| ||||| || || || | Sbjct 61 TGTCTTGAATCTTTGCCTTTACGTTCTCGATAGTGTCTGATGGCTCAACATCTAGAGTGA 120 Query 140701 CTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || || || || || ||||| ||||||||| Sbjct 121 TGGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCATT 158 >seq333 Length=50985 Score = 100 bits (110), Expect = 9e-16 Identities = 75/84 (89%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 423766 GCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAAG-CCTCG 423823 ||| ||||||||||||||| ||||||||| ||||||||||| |||| |||||| || || Sbjct 41763 GCACGGATGCCCGAGTGGT-TAAGGGGGCGGACTTAAGATCCCCTGGTCGAAAGACCGCG 41821 Query 423824 TGGGTTCAAACCCCACTCCGTGCA 423847 ||||||| |||||||||||||||| Sbjct 41822 TGGGTTCGAACCCCACTCCGTGCA 41845 Score = 95.1 bits (104), Expect = 4e-14 Identities = 75/86 (87%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 423765 AGCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAAGC-CTC 423822 |||| ||||||||||||||| ||||||||| ||||||||||| ||| |||||| | | Sbjct 41591 AGCACGGATGCCCGAGTGGT-TAAGGGGGCGGACTTAAGATCCCCTGATCGAAAGATCGC 41533 Query 423823 GTGGGTTCAAACCCCACTCCGTGCAT 423848 |||||||| ||||||||||||||||| Sbjct 41532 GTGGGTTCGAACCCCACTCCGTGCAT 41507 >seq2655 Length=37609 Score = 91.5 bits (100), Expect = 4e-13 Identities = 142/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 378250 GTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTC- 378308 ||||| ||||||||| || | || | | || ||||| ||||||||||| | ||| Sbjct 25518 GTTTTGCATGCAGTATCGATAATTCCTTCTCTGCCTCCCATAGCATGGAAGAAAAGTTCT 25577 Query 378309 AGTAGGAGTAAGTCCACCAATAAATGAACT---CTCAATAAATCCTCTTGCGCCTGGCGA 378365 | ||||||| ||| | || |||| ||||| ||| ||||| |||| || Sbjct 25578 TGAGGGAGTAA----ACCTGTTAAATAACTATGCTCAACAAACCCTCTACTCTCTGGAGA 25633 Query 378366 ATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTT 378425 | |||| |||| || ||||||| || | |||||| | ||| ||| | |||||||| || Sbjct 25634 GTAATCAAATTTACTAAAATGAGGCAAAGAACGATTATTAAAACCAAACGGAATTCGCTT 25693 Query 378426 TCCATCAACATTCTGTTGACC 378446 ||| |||||||| || || || Sbjct 25694 TCCTTCAACATTTTGCTGTCC 25714 >seq1017 Length=68859 Score = 91.5 bits (100), Expect = 4e-13 Identities = 72/84 (86%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 423766 GCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCT-GGCGAAAG-CCTCG 423823 ||| ||||| ||||||||||||||| | |||||| ||| |||| | |||||| | || || Sbjct 21900 GCACGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTGGGCGAACGCCCGCG 21959 Query 423824 TGGGTTCAAACCCCACTCCGTGCA 423847 |||||||||| ||||||||||||| Sbjct 21960 TGGGTTCAAATCCCACTCCGTGCA 21983 >seq653 Length=24909 Score = 87.8 bits (96), Expect = 5e-12 Identities = 80/98 (82%), Gaps = 6/98 (6%) Strand=Plus/Plus Query 423766 GCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAAG-CCTCG 423823 ||| ||||| ||||||||||||||| | |||||| ||| |||| ||| || | | || || Sbjct 358 GCACGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTGGACGTACGTCCGCG 417 Query 423824 TGGGTTCAAACCCCACTCCGTGCA----TTTATTATAT 423857 |||||||||| |||||| |||||| |||||||||| Sbjct 418 TGGGTTCAAATCCCACTTCGTGCACTTCTTTATTATAT 455 >seq583 Length=104782 Score = 87.8 bits (96), Expect = 5e-12 Identities = 105/139 (76%), Gaps = 8/139 (6%) Strand=Plus/Minus Query 424179 GCCCCTGTGGCGTAATTGGATAGCGCACCAGACTTCTAATCTGGGGGTTGCGAGTTCGAA 424238 |||||||||||| ||| ||||||||| ||||||||||| ||||||| ||||||| Sbjct 98243 GCCCCTGTGGCGCAAT-GGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAA 98185 Query 424239 TCTCGCCAGGGGTTTttataataagtatttatgatacttattataagccaattaaaaaat 424298 || |||| ||||| || ||||| || || |||| ||| |||| ||||||| ||| Sbjct 98184 TCCCGCCGGGGGTGCTTTAAATAA-TAAATAAGATAAATATAATAA--CAATTAATTAAT 98128 Query 424299 ataataattatataGTTTA 424317 |||||| ||||||| Sbjct 98127 ----TAATTAGTTAGTTTA 98113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515188100517245