Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq717 87.8 2e-12 >seq717 Length=92321 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 155877 ATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCA 155936 || || || | ||| || ||||| || || || |||||||| || || |||||||| Sbjct 43798 ATCTGCAGCCTCCCTTTCTCATCCGGCAAACCTATTTCTATTAGCACCTCGAACCGCCCT 43857 Query 155937 GGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATG 155996 ||||| | || ||||| || |||| ||| ||||||| ||||| || || | |||||| Sbjct 43858 GGTCTCAGCAAGGCTTCATCTATTAGATCGAGTCTGTTCGTCATTCCAATCAACAAAATG 43917 Query 155997 TTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTACGGCGTC 156052 ||||||| | | || || || || || || | | ||||| ||||| | ||| Sbjct 43918 TTGTTTAGGGCGTTCACGCCATCGATCTTGGAGAGCAGCTGATTCACTACCGAGTC 43973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667046724227400