Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq443 168 2e-36 seq743 116 9e-21 >seq443 Length=45324 Score = 168 bits (186), Expect = 2e-36 Identities = 161/205 (79%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| ||||| || || || |||||||| || || || || |||||| Sbjct 76 CAAATCTTTGTGAAGACTCTGACTGGCAAGACGATCACTCTTGATGTTGAGCCATCAGAC 135 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || ||||||||||||||| || ||||| ||||| || ||||| Sbjct 136 ACTATCGAGAACGTGAAGGCAAAGATTCAGGACAAGGAGGGAATTCCTCCTGATCAGCAG 195 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || ||||| || ||||| |||||||| ||||| || | ||||||||| | Sbjct 196 CGTCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGGAGGACGCTGTCTGATTATAACATT 255 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| ||||| || || |||| Sbjct 256 CAGAAAGAGTCAACCCTTCA-CTTG 279 >seq743 Length=20979 Score = 116 bits (128), Expect = 9e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || ||||| || || || || |||||| Sbjct 154 CAGATCTTTGTCAAGACCCTCACGGGGAAGACCATCACTCTAGATGTTGAGCCATCAGAC 95 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || ||||||||| ||||| || ||||| ||||| || ||||| Sbjct 94 ACTATCGAGAACGTAAAGGCAAAGATTCAAGACAAGGAGGGAATTCCTCCTGATCAGCAG 35 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATG 178077 || ||||| || ||||| || ||||| ||||||| Sbjct 34 CGTCTTATTTTTGCCGGCAAGCAGCTGGAAGATG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203678531117510