Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05]
3,415 sequences; 45,830,609 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq144 140 3e-28
seq443 100 3e-16
>seq144
Length=153386
Score = 140 bits (154), Expect = 3e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| || || ||||| |||||||||||||| ||||||||||| || | |||| ||
Sbjct 49654 ACCAGGTGGAGTGTGCTTTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCGTCATCA 49713
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|||||||| || || || || |||||||| ||||| | |||| | |||||||||| |
Sbjct 49714 AGCTGCTTCCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 49773
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| ||| ||||| | |||||| | |||||| || | || || ||||||
Sbjct 49774 ATCTTTGCCTTCACATTTTCGATAGTGTCAGAAGGCTCCACATCAAGGGTAATGGTTTTA 49833
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| |||||||| || ||||| ||||| ||
Sbjct 49834 CCCGTTAGCGTCTTCACAAAAATTTGCATCTT 49865
>seq443
Length=45324
Score = 100 bits (110), Expect = 3e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||||| || || || ||| |||||||||||||| || || || || | | | || ||
Sbjct 282 CACCAAGTGAAGGGTTGACTCTTTCTGAATGTTATAATCAGACAGCGTCCTCCCATCTTC 223
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
|||||||||||||| || || || ||||| || || | |||| | |||||||||| |
Sbjct 222 CAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCC-T 164
Query 41773 GATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
|| | |||| ||||| | | |||||| | ||| || || | || ||||| |
Sbjct 163 GAATCTTTGCCTTCACGTTCTCGATAGTGTCTGATGGCTCAACATCAAGAGTGATCGTCT 104
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || ||||| ||||| || || || ||||||
Sbjct 103 TGCCAGTCAGAGTCTTCACAAAGATTTGCATG 72
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462284265398000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |