Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2336 89.7 5e-13 >seq2336 Length=37921 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| |||| |||||||| | ||||| || || || | || ||||| | Sbjct 37862 CCACCTCTCAGGCGCAGAACCAAGTGAAGGGTAGACTCTTTCTGAATATTGTAATCAGAC 37803 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | || |||||||| || || | || || | | |||||||| || ||| Sbjct 37802 AGCGTCCTTCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGACGCTGCTGATCAGGGGGA 37743 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | ||| |||||||| || ||| || || | | || || Sbjct 37742 ATGCCTTCCTTGTCTTGAATCTTTGCCTTCACATTTTCGATTGTATCTGATGGCTCAACA 37683 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || || || || |||||||||||||| Sbjct 37682 TCTAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 37636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448243148787000