Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2981 102 2e-16 >seq2981 Length=26860 Score = 102 bits (112), Expect = 2e-16 Identities = 287/440 (65%), Gaps = 12/440 (3%) Strand=Plus/Minus Query 364066 TACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGG 364125 ||||||||||| ||| ||||| | || | | | | ||| || |||||||||||| Sbjct 8187 TACGAAAAGTACGAAAGAGAGGGGAGGGGGAGAAGGTCTATTGAAGCCCAGAAGCTATGG 8128 Query 364126 TTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCG 364185 ||||| || | | || || || || ||||| || || |||||||||||||||||| | Sbjct 8127 TTTGCAATATTACAGTCCCAAATAGAAACAGGGACCCCGTATATGTTGTACAAAGATGCA 8068 Query 364186 TGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACC 364245 |||||| || ||||||| || ||||| |||||| |||||| |||| Sbjct 8067 TGCAACGAGAAAAGTAACCAGCGACATCTTGGGCCAATTCGATCTAGCAACTTATGCTGT 8008 Query 364246 GAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCG 364305 || || ||| ||| || || || || ||| || |||||| | ||||| || | Sbjct 8007 GAAATAATTCAATTTACGAGCCCAGATGAAGTTGCTGTGTGTAACTTGGCGTCTATTTCC 7948 Query 364306 CTTCCGGCGTTTGTAAAAGATGG------TACTTTTGACCACCAGCATCTTTATGA---C 364356 || || |||||| | || || | |||||| | | || | | | Sbjct 7947 CTCCCCCGTTTTGTAGATGAAGGGGAGAAAAGGTTTGACTTTGAAAAGCTGAAAAAAATC 7888 Query 364357 GTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATT 364416 |||| | | ||||| ||| || |||| ||||||||| || ||||| ||| | Sbjct 7887 GTAA---AGGTGGTTACTTACAACCTTAACAACGTTATCGACGCCAACTATTACCCAGTG 7831 Query 364417 CCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTC 364476 || || || || | ||||| | ||| | || ||||| | || ||||||||| | Sbjct 7830 CCCGAGGCAGAAATTAGTAATAAAAGGCATAGGCCCATTGGCGTGGGGGTACAGGGCTTA 7771 Query 364477 GCTGACGTTTTTATGATGCT 364496 ||||||| || || |||| Sbjct 7770 GCTGACGCCTTCTTGCTGCT 7751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303210404205650