Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07]
8,575 sequences; 66,890,165 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2336 107 2e-18
seq1396 98.7 1e-15
>seq2336
Length=37921
Score = 107 bits (118), Expect = 2e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
|| |||||| || || || || || ||||||||||| |||||||| | || || ||| |
Sbjct 37632 AACAATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACCATCACTTTAGATGTTGAGCC 37691
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| || | | ||| | || | ||| || | ||||| || || |||||| | ||
Sbjct 37692 ATCAGATACAATCGAAAATGTGAAGGCAAAGATTCAAGACAAGGAAGGCATTCCCCCTGA 37751
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| ||||| ||||||| ||| ||||| |||||||| |||| | || || || ||
Sbjct 37752 TCAGCAGCGTCTCATTTTCGCAGGCAAGCAGCTGGAAGACGGAAGGACGCTGTCTGATTA 37811
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||| || || || || | || || || ||||| ||||| ||||||| |||
Sbjct 37812 CAATATTCAGAAAGAGTCTACCCTTCACTTGGTTCTGCGCCTGAGAGGTGGC 37863
>seq1396
Length=53008
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || || || || ||||| ||||| ||||| || ||| | || || ||| |
Sbjct 39694 AAGATGCAGATTTTTGTGAAGACGCTGACGGGGAAAACTATTACCCTTGATGTGGAGCCT 39635
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | ||| | || | ||||||| || ||||| || ||||| | |||
Sbjct 39634 TCTGACACTATCGAAAATGTAAAGGCCAAAATCCAGGATAAAGAAGGCATTCCACCAGAC 39575
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || |||| || || || ||||| || || | | || ||| |||||||
Sbjct 39574 CAGCAGCGTCTTATTTTTGCTGGAAAGCAGCTTGATGATGGCAGAACTCTCTCCGACTAC 39515
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
||||| ||||| ||| || ||||| |||||
Sbjct 39514 AACATTCAAAAAGAAAGCACCCTGCACTTGGT 39483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500119187728000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |