Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1396 82.4 6e-11 >seq1396 Length=53008 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || ||||| || || | ||||| ||||| |||||| || ||| ||| Sbjct 39694 AAGATGCAGATTTTTGTGAAGACGCTGACGGGGAAAACTATTACCCTTGATGTGGAGCCT 39635 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || | ||| |||||| || ||||| || | || ||| Sbjct 39634 TCTGACACTATCGAAAATGTAAAGGCCAAAATCCAGGATAAAGAAGGCATTCCACCAGAC 39575 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || ||| | ||||| ||||| || || || | || ||| | |||| | |||| || Sbjct 39574 CAGCAGCGTCTTATTTTTGCTGGAAAGCAGCTTGATGATGGCAGAACTCTCTCCGACTAC 39515 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 ||||||||||||||| || |||||| ||||| Sbjct 39514 AACATTCAAAAAGAAAGCACCCTGCACTTGGTA 39482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425360341874925