Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2981 141 5e-29 >seq2981 Length=26860 Score = 141 bits (156), Expect = 5e-29 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25916 TTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTC 25975 ||||| | |||| | ||||| || ||||| || ||||| | || ||| | |||||| Sbjct 9015 TTTTGATAAACTCTTTCCATGAACAAATCCGGGATCCAAAGAGCTGGAAAAAGATCTCTT 9074 Query 25976 GCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAG 26035 || |||||||||||||||||||| || ||| | |||| || ||||| | ||||| Sbjct 9075 GCCCTCATTTCTTCTTTTCCGTGGTTTTTTCGGATTTCTAGAAACTCAAATACATCTGCA 9134 Query 26036 TGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACG 26095 ||||| || || ||||| | || ||||| |||||||||||||| || |||||||||||| Sbjct 9135 TGCCACGGCTCCAAATAAACGGCTAAACTCCCTTTTCTTTTTCCCCCTCCTTGATCTACG 9194 Query 26096 TATCTTGCAGTTTCATTGAAAAC 26118 || | | || ||||| || || Sbjct 9195 TAGCGAGAAGCATCATTAAAGAC 9217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253013555343125