Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1396 95.1 2e-14 >seq1396 Length=53008 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || ||| | || || |||| || ||||||||||| | || || || | Sbjct 39694 AAGATGCAGATTTTTGTGAAGACGCTGACGGGGAAAACTATTACCCTTGATGTGGAGCCT 39635 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | ||| ||| || || ||||| || |||||||||||||| || ||||| Sbjct 39634 TCTGACACTATCGAAAATGTAAAGGCCAAAATCCAGGATAAAGAAGGCATTCCACCAGAC 39575 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || | | |||| ||| || |||||||| || ||| ||||||| | || || || Sbjct 39574 CAGCAGCGTCTTATTTTTGCTGGAAAGCAGCTTGATGATGGCAGAACTCTCTCCGACTAC 39515 Query 156000 AATAT 156004 || || Sbjct 39514 AACAT 39510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731793552470000