Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1396 89.7 9e-13 >seq1396 Length=53008 Score = 89.7 bits (98), Expect = 9e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 171879 TCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAA 171938 ||||| ||| || || || || | || || | ||||| | || || ||||||||| Sbjct 39501 TCTTTTTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATCAAGCTGCTTTCCAGCAAAA 39560 Query 171939 ATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 171998 || | | ||| ||||| ||||| || ||||||||||| || ||||| |||||||| Sbjct 39561 ATAAGACGCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGGATTTTGGCCTTTACATTT 39620 Query 171999 GTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATG 172058 ||||| || || | || || || || ||||| ||||| || || | || || | Sbjct 39621 TCGATAGTGTCAGAAGGCTCCACATCAAGGGTAATAGTTTTCCCCGTCAGCGTCTTCACA 39680 Query 172059 AATATCTGCATTTT 172072 || |||||||| || Sbjct 39681 AAAATCTGCATCTT 39694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905038980735000