Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1396 89.7 4e-13 >seq1396 Length=53008 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||| || ||||| || || | || || ||||| |||||| | || ||||||| Sbjct 39694 AAGATGCAGATTTTTGTGAAGACGCTGACGGGGAAAACTATTACCCTTGATGTGGAGCCT 39635 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || ||| ||| | ||||| || || || ||||||||| | || || Sbjct 39634 TCTGACACTATCGAAAATGTAAAGGCCAAAATCCAGGATAAAGAAGGCATTCCACCAGAC 39575 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | ||||||| ||| || || ||||| || |||| |||||| | | || ||| Sbjct 39574 CAGCAGCGTCTTATTTTTGCTGGAAAGCAGCTTGATGATGGCAGAACTCTCTCCGACTAC 39515 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||||||||||||| || ||||| |||| Sbjct 39514 AACATTCAAAAAGAAAGCACCCTGCACTTGGT 39483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412798454827475