Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2336 104 2e-17 >seq2336 Length=37921 Score = 104 bits (114), Expect = 2e-17 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| | ||| |||| ||||| ||| ||| |||||||| || || || || Sbjct 37862 CCACCTCTCAGGCGCAGAACCAAGTGAAGGGTAGACTCTTTCTGAATATTGTAATCAGAC 37803 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | | || ||||| ||||| || ||||| || || || ||||| || | || Sbjct 37802 AGCGTCCTTCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGACGCTGCTGATCAGGGGGA 37743 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTC-AT-TG--GCCTC 34926 | || |||||||| | || ||| || || || | |||||| || || | ||| Sbjct 37742 ATGCCTTCCTTGTCTTGAATCTTTGCCTTCAC--AT--TTTCGATTGTATCTGATGGCTC 37687 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| | || |||||||| |||||||||||||| |||||||||||||| Sbjct 37686 AACATCTAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 37636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325658762557925