Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1396 113 3e-20 >seq1396 Length=53008 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| || || ||| ||||||||||||||| || || | | || | |||||| Sbjct 39483 ACCAAGTGCAGGGTGCTTTCTTTTTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATCA 39542 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 || || || |||||| | || | | ||||| || || ||||| || ||||| || || Sbjct 39543 AGCTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGG 39602 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | ||| || ||| |||| | |||||||||| | || || ||||| || |||||||| Sbjct 39603 ATTTTGGCCTTTACATTTTCGATAGTGTCAGAAGGCTCCACATCAAGGGTAATAGTTTTC 39662 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || | || || ||||| |||||||| || Sbjct 39663 CCCGTCAGCGTCTTCACAAAAATCTGCATCTT 39694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385178941584075