Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2336 93.3 3e-14 >seq2336 Length=37921 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| || | ||||| || || || |||||| || || |||||||| || Sbjct 37862 CCACCTCTCAGGCGCAGAACCAAGTGAAGGGTAGACTCTTTCTGAATATTGTAATCAGAC 37803 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | |||| |||| || || || || ||||| | |||||||||||| | || Sbjct 37802 AGCGTCCTTCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGACGCTGCTGATCAGGGGGA 37743 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||| || || | |||| || | || || || || || Sbjct 37742 ATGCCTTCCTTGTCTTGAATCTT-TGCCTTCACATTTTCGATTGTATCTGATGGCTCAAC 37684 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 || | ||||| || || || || | || || |||||||||||||| |||| Sbjct 37683 ATCTAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCATTGTTG 37631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328669647864000