Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq1321 102 8e-17 seq866 102 8e-17 seq559 98.7 9e-16 seq2571 96.9 3e-15 seq150 96.9 3e-15 seq1630 93.3 4e-14 seq5659 82.4 7e-11 seq3072 82.4 7e-11 seq1767 82.4 7e-11 >seq1321 Length=54140 Score = 102 bits (112), Expect = 8e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 52323 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 52264 Query 39838 CCCGGTGCCCGTATTT 39853 |||||||||||||||| Sbjct 52263 CCCGGTGCCCGTATTT 52248 Score = 93.3 bits (102), Expect = 4e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||| ||||| ||| Sbjct 45350 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCCGGTTCGATC 45291 Query 39838 CCCGGTGCCCGTAT 39851 |||||||||||||| Sbjct 45290 CCCGGTGCCCGTAT 45277 >seq866 Length=8168 Score = 102 bits (112), Expect = 8e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 6441 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 6500 Query 39838 CCCGGTGCCCGTATTT 39853 |||||||||||||||| Sbjct 6501 CCCGGTGCCCGTATTT 6516 >seq559 Length=68030 Score = 98.7 bits (108), Expect = 9e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 28792 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 28733 Query 39838 CCCGGTGCCCGTATTTC 39854 ||||||||||||| ||| Sbjct 28732 CCCGGTGCCCGTACTTC 28716 >seq2571 Length=35590 Score = 96.9 bits (106), Expect = 3e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 34743 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 34802 Query 39838 CCCGGTGCCCGTA 39850 ||||||||||||| Sbjct 34803 CCCGGTGCCCGTA 34815 >seq150 Length=16961 Score = 96.9 bits (106), Expect = 3e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 15506 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 15447 Query 39838 CCCGGTGCCCGTATTT 39853 ||||||||||||| || Sbjct 15446 CCCGGTGCCCGTACTT 15431 >seq1630 Length=3189 Score = 93.3 bits (102), Expect = 4e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| ||||||||| || |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 2941 GCGGGCATGGTCTAGNGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 3000 Query 39838 CCCGGTGCCCGTA 39850 ||||||||||||| Sbjct 3001 CCCGGTGCCCGTA 3013 >seq5659 Length=396 Score = 82.4 bits (90), Expect = 7e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||| |||||||||| |||||| ||||||||||||||| | ||||||||| | Sbjct 237 GCGGGGTTGGTGTAGTGGTTATCACGTCTGCTTTACACGCAGAAGGCCGCGGGTTCAAAC 178 Query 39838 CCCGGTGCCCGTA--TTTCTGA 39857 |||| |||||| ||||||| Sbjct 177 CCCGCACCCCGTACGTTTCTGA 156 >seq3072 Length=95597 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/94 (80%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| ||||||||||| |||| ||| | | |||||| |||||||||||||| ||| Sbjct 93893 GCGGGCGTGGTCTAGTGGCTATGACGTTCGCCTCACACGCGAAAGGTCCCGGGTTCGATC 93834 Query 39838 CCCGGTGCCCGTATTTCTGATAACTTTTCTTTTT 39871 ||||| |||||||||| | | | |||| ||||| Sbjct 93833 CCCGGCGCCCGTATTTTT--TTATTTTTATTTTT 93802 >seq1767 Length=125739 Score = 82.4 bits (90), Expect = 7e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||| |||||||||| |||||| ||||||||||||||| | ||||||||| | Sbjct 100161 GCGGGGTTGGTGTAGTGGTTATCACGTCTGCTTTACACGCAGAAGGCCGCGGGTTCAAAC 100220 Query 39838 CCCGGTGCCCGTA--TTTCTGA 39857 |||| |||||| ||||||| Sbjct 100221 CCCGCACCCCGTACGTTTCTGA 100242 Score = 82.4 bits (90), Expect = 7e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||| |||||||||| |||||| ||||||||||||||| | ||||||||| | Sbjct 103540 GCGGGGTTGGTGTAGTGGTTATCACGTCTGCTTTACACGCAGAAGGCCGCGGGTTCAAAC 103599 Query 39838 CCCGGTGCCCGTA--TTTCTGA 39857 |||| |||||| ||||||| Sbjct 103600 CCCGCACCCCGTACGTTTCTGA 103621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466074837248000