Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1396 98.7 9e-16 seq2336 86.0 6e-12 >seq1396 Length=53008 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | || || || |||||||||||||| |||| | |||| | || || Sbjct 39483 ACCAAGTGCAGGGTGCTTTCTTTTTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATCA 39542 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || ||||| || | ||||||||||| | |||| || || || ||| | Sbjct 39543 AGCTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGG 39602 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 || || ||| | | || | | ||||| | ||||| || | || || ||||| Sbjct 39603 ATTTTGGCCTTTACATTTTCGATAGTGTCAGAAGGCTCCACATCAAGGGTAATAGTTTTC 39662 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || |||||||| |||||||| Sbjct 39663 CCCGTCAGCGTCTTCACAAAAATCTGCAT 39691 >seq2336 Length=37921 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| ||| || ||||| |||||||| | || || | |||| ||| Sbjct 37844 ACCAAGTGAAGGGTAGACTCTTTCTGAATATTGTAATCAGACAGCGTCCTTCCGTCTTCC 37785 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || || | |||||||| || | |||| || |||||||| Sbjct 37784 AGCTGCTTGCCTGCGAAAATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCTTGA 37725 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||||| ||||| | || | | || || | || || || | ||||| || || Sbjct 37724 ATCTTTGCCTTCACATTTTCGATTGTATCTGATGGCTCAACATCTAAAGTGATGGTCTTG 37665 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||| | || || ||||| ||||||||| Sbjct 37664 CCCGTGAGGGTCTTGACAAAGATCTGCATT 37635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450745280561000