Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq7544 84.2 2e-11 seq3069 84.2 2e-11 seq2799 84.2 2e-11 seq394 84.2 2e-11 seq45 84.2 2e-11 >seq7544 Length=226 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 68 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 9 Query 102532 GACC 102535 |||| Sbjct 8 GACC 5 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 102480 TAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGAGACC 102535 ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||||||| Sbjct 225 TAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGAGACC 170 >seq3069 Length=24005 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 23866 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 23807 Query 102532 GACC 102535 |||| Sbjct 23806 GACC 23803 >seq2799 Length=33582 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 22761 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 22820 Query 102532 GACC 102535 |||| Sbjct 22821 GACC 22824 >seq394 Length=13118 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 10942 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 10883 Query 102532 GACC 102535 |||| Sbjct 10882 GACC 10879 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 12143 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 12202 Query 102532 GACC 102535 |||| Sbjct 12203 GACC 12206 >seq45 Length=18374 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 12839 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 12780 Query 102532 GACC 102535 |||| Sbjct 12779 GACC 12776 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 13004 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 12945 Query 102532 GACC 102535 |||| Sbjct 12944 GACC 12941 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 13169 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 13110 Query 102532 GACC 102535 |||| Sbjct 13109 GACC 13106 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 13334 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 13275 Query 102532 GACC 102535 |||| Sbjct 13274 GACC 13271 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 13499 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 13440 Query 102532 GACC 102535 |||| Sbjct 13439 GACC 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465479701046000