Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1645 89.7 4e-13 >seq1645 Length=49394 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 43871 AGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCA 43930 |||||||||||||| | |||||||||| ||||| | || || ||| | || Sbjct 40755 AGCGACGGGATAGTTATGGAAAATTTGGCGGAGAGGTTTATGTCGGAGGTGCAAATCCCC 40696 Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990 ||||| ||| ||||||||| ||||||||||| |||||||||| ||||| |||| ||| Sbjct 40695 GAAGCTCGAAGTTTTTATGCTTTTCAAATTGCTGTAGAAAATATCCATTCAGAAACATAC 40636 Query 43991 AG 43992 || Sbjct 40635 AG 40634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397414462742875