Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1396 95.1 8e-15 >seq1396 Length=53008 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || || ||||| || ||||||||||| || || || || |||| | || ||| Sbjct 39483 ACCAAGTGCAGGGTGCTTTCTTTTTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATCA 39542 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || || ||||| || | |||||| ||||| || || | || || || || | Sbjct 39543 AGCTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGG 39602 Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 || || |||| | || ||||| |||||| || | ||| || ||||| Sbjct 39603 ATTTTGGCCTTTACATTTTCGATAGTGTCAGAAGGCTCCACATCAAGGGTAATAGTTTTC 39662 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || || | ||| ||||||||||||||||| || Sbjct 39663 CCCGTCAGCGTCTTCACAAAAATCTGCATCTT 39694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314696708297975