Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq3113 84.2 2e-11 seq750 84.2 2e-11 seq40 82.4 8e-11 >seq3113 Length=22562 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 27083 ACGCCTTCTTAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGA 27142 |||||| |||||| |||||||||| ||| |||| | |||||||| ||||||||||||||| Sbjct 5796 ACGCCTCCTTAGCACAGTTGGTAGTGCGTTTGATTCGTAATCAAAAGGTCGTGGGTTCGA 5737 Query 27143 ATCCTACAG 27151 ||| |||| Sbjct 5736 TTCCCACAG 5728 >seq750 Length=146864 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 27083 ACGCCTTCTTAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGA 27142 |||||| |||||| |||||||||| ||| |||| | |||||||| ||||||||||||||| Sbjct 60777 ACGCCTCCTTAGCACAGTTGGTAGTGCGTTTGATTCGTAATCAAAAGGTCGTGGGTTCGA 60836 Query 27143 ATCCTACAG 27151 ||| |||| Sbjct 60837 TTCCCACAG 60845 >seq40 Length=18622 Score = 82.4 bits (90), Expect = 8e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 27084 CGCCTTCTTAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGAA 27143 ||||| |||||| |||||||||| ||| |||| | |||||||| ||||||||||||||| Sbjct 1721 CGCCTCCTTAGCACAGTTGGTAGTGCGTTTGATTCGTAATCAAAAGGTCGTGGGTTCGAT 1780 Query 27144 TCCTACAG 27151 ||| |||| Sbjct 1781 TCCCACAG 1788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519771481022000