Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2336 181 2e-40 >seq2336 Length=37921 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || |||||||| || || || ||||| | || |||||||| ||| Sbjct 37847 AGAACCAAGTGAAGGGTAGACTCTTTCTGAATATTGTAATCAGACAGCGTCCTTCCGTCT 37788 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||||||||| || || || || || ||||| |||| ||||||||||| Sbjct 37787 TCCAGCTGCTTGCCTGCGAAAATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCT 37728 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| ||||| |||||||| || || || ||||| || | |||||| ||| Sbjct 37727 TGAATCTTTGCCTTCACATTTTCGATTGTATCTGATGGCTCAACATCTAAAGTGATGGTC 37668 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || |||||||| ||||| ||||| | ||||||| Sbjct 37667 TTGCCCGTGAGGGTCTTGACAAAGATCTGCATT 37635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159024647229875