Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2045 91.5 3e-13 seq471 89.7 1e-12 seq3164 87.8 4e-12 seq673 87.8 4e-12 seq132 87.8 4e-12 seq3462 84.2 5e-11 seq1134 84.2 5e-11 >seq2045 Length=39908 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||| | ||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct 8944 TTGCCGATTTAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGA 9003 Query 165768 GCCCC 165772 ||||| Sbjct 9004 GCCCC 9008 >seq471 Length=31559 Score = 89.7 bits (98), Expect = 1e-12 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 165704 ACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGT 165763 || || ||| | ||||||||||||||||||||||| ||||||| |||||||||| |||| Sbjct 20487 ACACTCGCCGATTTAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGT 20546 Query 165764 TCGAGCCCC 165772 ||||||||| Sbjct 20547 TCGAGCCCC 20555 >seq3164 Length=26728 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 20902 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 20847 >seq673 Length=14928 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 2736 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 2681 >seq132 Length=8952 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 1518 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 1463 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 1689 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 1744 >seq3462 Length=15340 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| Sbjct 14971 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCAGGTTCGAGCCCC 14916 >seq1134 Length=8389 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||| | ||||||| |||||||||| ||||||||||||| Sbjct 3732 TAGCTCAGTCGGTAGAGCGCCCGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 3787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057775695789320