Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq270 89.7 5e-13 >seq270 Length=46145 Score = 89.7 bits (98), Expect = 5e-13 Identities = 124/172 (72%), Gaps = 15/172 (9%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||||||||| | ||| | | | || ||||| || |||||||| | |||||| || | | Sbjct 45926 TTTGGTAATCCCCAACTCTTCTCTCAAAGAAATTTGTTTTTCCTTGTAAAGAAATCATAT 45985 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAAC-- 16029 ||||||||||||| ||||| | | ||||||||| | | || ||| ||| Sbjct 45986 CCATAAAATCAAAAGGATTTCTTACATTAAATATCTT----TTCTCC---TCCTAAACAA 46038 Query 16030 -----TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTC-GCAA 16075 ||| | ||| || |||||||||||||||||| ||||||| || |||| Sbjct 46039 ACTAATAAACGATCAGCAACAAATTCTATATATTGAGACATTAAATCTGCAA 46090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511391616488480