Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3187 98.7 1e-15 >seq3187 Length=81671 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || ||||| ||||| || || || ||| | || || || | Sbjct 67370 AAGATGCAGATTTTTGTGAAGACGCTGACGGGGAAGACTATTACCCTTGATGTGGAGCCT 67429 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | ||| | |||| || |||| ||||||||||| || || | ||| Sbjct 67430 TCCGACACTATCGAAAATGTGAAGGCGAAGATTCAGGACAAAGAGGGTATTCCTCCAGAC 67489 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || |||| ||| || || ||||| || |||| | || ||| ||||||| Sbjct 67490 CAGCAGCGCCTTATCTTCGCTGGAAAGCAGCTTGATGACGGCAGAACTCTCTCCGACTAC 67549 Query 40867 AACATCCAGAAGGA 40880 || || |||||||| Sbjct 67550 AATATTCAGAAGGA 67563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515196246984640