Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3187 111 2e-19 seq706 84.2 3e-11 >seq3187 Length=81671 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||||| ||||| ||||||||||| || | ||||| | ||||||| Sbjct 67581 ACCAAGTGAAGAGTGCTTTCCTTCTGAATATTGTAGTCGGAGAGAGTTCTGCCGTCATCA 67522 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| |||||||| || || ||||||||||| | || | | ||| |||||| || Sbjct 67521 AGCTGCTTTCCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCC-TG 67463 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | | || | || | | | | |||||| | |||||||| | || || || || Sbjct 67462 AATCTTCGCCTTCACATTTTCGATAGTGTCGGAAGGCTCCACATCAAGGGTAATAGTCTT 67403 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 ||||| |||||||| ||||| || ||||| || Sbjct 67402 CCCCGTCAGCGTCTTCACAAAAATCTGCATCTT 67370 >seq706 Length=62036 Score = 84.2 bits (92), Expect = 3e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 60050 GTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCG 60109 ||||| |||||||| |||| | | |||||| |||||| ||||| |||||||||||||| Sbjct 1479 GTTTAGGAAAAATTG-CTCCGAGTCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCG 1537 Query 60110 GACATACTCACCACTATACTA 60130 || ||||| ||||||||||| Sbjct 1538 GAAATACTAGCCACTATACTA 1558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571792125525920