Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq270 122 8e-23 >seq270 Length=46145 Score = 122 bits (134), Expect = 8e-23 Identities = 129/164 (79%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || || | |||||| | |||||||||||||||||||||| ||| ||||| | Sbjct 45925 TTTTGGTAATCCCCAACTCTTCTCTCAAAGAAATTTGTTTTTCCTTGTAAAGAAATCATA 45984 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAAT-AGTAT-TTATCGCATCCCAATTCCAAC- 16060 ||||||||||||||||||||| || ||| | | ||| || || | ||| || | ||| Sbjct 45985 TCCATAAAATCAAAAGGATTTCTT--ACATTAAATATCTTTTCTCCTCCTAA-ACAAACT 46041 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATC 16104 ||||| | ||| || |||||||||||||| || ||||||||| Sbjct 46042 AATAAACGATCAGCAACAAATTCTATATATTGAGACATTAAATC 46085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462491395090400