Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq270 105 6e-18 >seq270 Length=46145 Score = 105 bits (116), Expect = 6e-18 Identities = 122/162 (75%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || || | ||||||| | |||||||| || ||||| |||| | || || | Sbjct 45925 TTTTGGTAATCCCCAACTCTTCTCTCAAAGAAATTTGTTTTTCCTTGTAAAGAAATCATA 45984 Query 13641 TCCATAAAATCAAATGGATTTATTGACA-TAAACACTTTATCACAACCTAGTTCTAATAG 13699 |||||||||||||| |||||| || ||| |||| | || || | |||| | || Sbjct 45985 TCCATAAAATCAAAAGGATTTCTT-ACATTAAATATCTTTTCTCCTCCTAAACAAACTAA 46043 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13741 ||| | |||||||| ||| || |||||||||||||||||||| Sbjct 46044 TAAACGATCAGCAACAAATTCTATATATTGAGACATTAAATC 46085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479706628117600